Quality issues are a huge problem in the R-loop mapping field. Before we can understand the R-loop landscape, we first need established mapping standards. We're developing a best-practices R-loop mapping pipeline with interactive quality reports to suite this need.
Python, R, Bash
Snakemake, ChIP-Seq, Linux, Software development
Avg. Hours / Week
Alex Bishop, D.Phil.
Publication if successful?
Trainee authorship criteria (if applicable)
Trainees who contribute meaningfully to the project will be listed as co-authors. E.g., performing an entire core analysis or developing a core component of project software.
NOTE: Spots available include 1 for Software/Workflow development (Do the Python Programming and Linux for Bioinformatics training); 1 for Data Analysis (Do the R programming and R for Data Science training)