RSeq

Active:

false

Description

Quality issues are a huge problem in the R-loop mapping field. Before we can understand the R-loop landscape, we first need established mapping standards. We're developing a best-practices R-loop mapping pipeline with interactive quality reports to suite this need.

Python, R, Bash

Snakemake, ChIP-Seq, Linux, Software development

Project Stage

Late

Avg. Hours / Week

7

Project Provider

Alex Bishop, D.Phil.

Commitment (Months)

6

Spots Open

2

Project Lead

Henry Miller

Publication if successful?

Yes

Trainee authorship criteria (if applicable)

Trainees who contribute meaningfully to the project will be listed as co-authors. E.g., performing an entire core analysis or developing a core component of project software.

NOTE: Spots available include 1 for Software/Workflow development (Do the Python Programming and Linux for Bioinformatics training); 1 for Data Analysis (Do the R programming and R for Data Science training)

Required Skill Assessments

Linux for Bioinformatics

R Programming

Python for Data Science

Python Programming

R for Data Science