Open Projects

Last updated: Mar 14, 2023

Multi-View Learning of Multi-Omics to Predict Patient Response to Cancer Immunotherapy

Machine Learning, Variant analysis, Data Integration

Python

Developing a method for analyzing A-to-I editing in intronic scRNA-Seq sequences. Using this to identify novel cell states.

scRNA-Seq, Linux, Snakemake/NextFlow, Method development

Bash, R, Snakemake or NextFlow

Predict Functional Phosphosites Using MAVE Datasets and Machine-Learning

Machine Learning, Method development

Python

Building an expression database for crohn's disease

RNA-Seq, Data Mining, R-Shiny

Building an expression database for type 2 diabetes

RNA-Seq, Data mining, R-Shiny